Information for 8-TCTCGCTCTC (Motif 6)


Reverse Opposite:

p-value:1e-12
log p-value:-2.771e+01
Information Content per bp:1.699
Number of Target Sequences with motif550.0
Percentage of Target Sequences with motif15.31%
Number of Background Sequences with motif5289.3
Percentage of Background Sequences with motif11.40%
Average Position of motif in Targets278.9 +/- 154.2bp
Average Position of motif in Background279.1 +/- 163.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCTCGCTCTC------
-ACCACTCTCGGTCAC

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCGCTCTC
NNAATTCTCGNTNAN

MA0051.1_IRF2/Jaspar

Match Rank:3
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------TCTCGCTCTC-
GTTTTGCTTTCACTTTCC

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCTCGCTCTC
AGTATTCTCGGTTGC

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTCGCTCTC
AGTTTCAGTTTC

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCTCGCTCTC
ACTTTCACTTTC

MA0050.2_IRF1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------TCTCGCTCTC-----
TTTTACTTTCACTTTCACTTT

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCTCGCTCTC
RSTTTCRSTTTC

MA0508.1_PRDM1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCTCGCTCTC-
TCACTTTCACTTTCN

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCTCGCTCTC
ACTTTCACTTTC