Information for 3-CTCGTCAT (Motif 9)


Reverse Opposite:

p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.947
Number of Target Sequences with motif196.0
Percentage of Target Sequences with motif5.46%
Number of Background Sequences with motif1525.1
Percentage of Background Sequences with motif3.29%
Average Position of motif in Targets278.4 +/- 149.8bp
Average Position of motif in Background279.7 +/- 157.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----CTCGTCAT--
NTTATTCGTCATNC

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CTCGTCAT-
---GTCATN

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTCGTCAT----
AAACCTCGTAAAATTT

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCGTCAT
-ACGTCA-

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCGTCAT
ACCACGTGAC

PH0152.1_Pou6f1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTCGTCAT----
GCAACCTCATTATNNNN

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTCGTCAT----
AAAGCTCGTAAAATTT

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:8
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------CTCGTCAT------
NTNNTNGTCACGTGACNNNTNC

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCGTCAT-
TCACGTGACC

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCGTCAT
KCCACGTGAC