Information for 5-ACRWGKAC (Motif 11)


Reverse Opposite:

p-value:1e-6
log p-value:-1.573e+01
Information Content per bp:1.687
Number of Target Sequences with motif181.0
Percentage of Target Sequences with motif6.83%
Number of Background Sequences with motif2161.0
Percentage of Background Sequences with motif4.59%
Average Position of motif in Targets273.6 +/- 145.7bp
Average Position of motif in Background272.5 +/- 175.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0083.1_Irx3_1/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------ACRWGKAC---
ANTATTACATGTANNNN

PH0084.1_Irx3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ACRWGKAC---
NNTATTACATGTANNNT

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ACRWGKAC---
ANTNTTACATGTATNTA

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ACRWGKAC---
NNTTTTACATGTANNNT

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ACRWGKAC----
AATATACATGTAAAATT

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACRWGKAC------
ACTCCAAGTACTTGGAA

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ACRWGKAC---
ANTTNTACATGTANTTN

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACRWGKAC--
CCAGGAACAG

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ACRWGKAC--
NNAGGGACAAGGGCNC

MA0058.2_MAX/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACRWGKAC
AAGCACATGG--