Information for 7-ARGTATAC (Motif 14)


Reverse Opposite:

p-value:1e-6
log p-value:-1.449e+01
Information Content per bp:1.694
Number of Target Sequences with motif398.0
Percentage of Target Sequences with motif15.01%
Number of Background Sequences with motif5567.8
Percentage of Background Sequences with motif11.83%
Average Position of motif in Targets272.8 +/- 155.2bp
Average Position of motif in Background275.2 +/- 167.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ARGTATAC
TAAGTAT--

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----ARGTATAC-
NNTATANATATACN

MA0033.1_FOXL1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ARGTATAC
TATACATA-

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ARGTATAC
GGTAAGTA---

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ARGTATAC-
AAAGTAAACA

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ARGTATAC-
AAAGTAAACA

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ARGTATAC---
AAGGATATNTN

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ARGTATAC------
AAAAAGTAAACAAAGAC

MA0148.3_FOXA1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ARGTATAC-----
CAAAGTAAACANNNN

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ARGTATAC--
ATGMATATDC