Information for 10-TTCGTTGG (Motif 16)


Reverse Opposite:

p-value:1e-5
log p-value:-1.270e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif94.1
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets314.2 +/- 161.0bp
Average Position of motif in Background275.4 +/- 157.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0161.1_NFIC/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTCGTTGG--
----TTGGCA

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTCGTTGG-----
-TGATTGGCTANN

MA0133.1_BRCA1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTCGTTGG
-GTGTTGN

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCGTTGG--
TTCTNMGGAA

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGTTGG---
NNAATTTTATTGGNTN

MA0502.1_NFYB/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTCGTTGG-------
CTGATTGGTCNATTT

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTCGTTGG-
ACTTTCGTTTCT

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCGTTGG------
NGTAGGTTGGCATNNN

MA0520.1_Stat6/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCGTTGG-----
ANTTCTCAGGAANNN

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTCGTTGG--
CCGATTGGCT