Information for 21-GGGCCGGTGT (Motif 18)


Reverse Opposite:

p-value:1e-4
log p-value:-9.322e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets248.9 +/- 167.8bp
Average Position of motif in Background433.9 +/- 129.1bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)3.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0202.1_Zfp410_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCCGGTGT--
NNTNNGGGGCGGNGNGN

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGCCGGTGT-
-NNCAGGTGNN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGCCGGTGT
-GGCVGTTR-

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCCGGTGT-
NNTNAGGGGCGGNNNN

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGCCGGTGT---
NNAGGGGCGGGGTNNA

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCGGTGT-
GGGGGCGGGGCC

MA0103.2_ZEB1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGGCCGGTGT--
---CAGGTGAGG

MA0522.1_Tcf3/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGCCGGTGT-
NTGCAGCTGTG

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGGCCGGTGT--
AGGGGGCGGGGCTG

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGGCCGGTGT-
NNNAAGGGGGCGGGNNN