Information for 19-TAHCCTAYCCTM (Motif 19)


Reverse Opposite:

p-value:1e-3
log p-value:-7.757e+00
Information Content per bp:1.579
Number of Target Sequences with motif799.0
Percentage of Target Sequences with motif30.14%
Number of Background Sequences with motif12812.5
Percentage of Background Sequences with motif27.21%
Average Position of motif in Targets267.9 +/- 154.6bp
Average Position of motif in Background278.7 +/- 160.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0107.1_Ascl2_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAHCCTAYCCTM--
CTATCCCCGCCCTATT

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAHCCTAYCCTM---
ANNTNCCCACCCANNAC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TAHCCTAYCCTM
--CCCCCCCC--

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAHCCTAYCCTM
-GCCCCGCCCC-

MA0039.2_Klf4/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAHCCTAYCCTM
-GCCCCACCCA-

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TAHCCTAYCCTM--
TCGACCCCGCCCCTAT

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAHCCTAYCCTM
-GCCMCRCCCH-

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAHCCTAYCCTM--
NNAGTCCCACTCNNNN

MA0493.1_Klf1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAHCCTAYCCTM
GGCCACACCCA-

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TAHCCTAYCCTM-
-ACCACATCCTGT