Information for 4-TTCTCAGAAACT (Motif 2)


Reverse Opposite:

p-value:1e-23
log p-value:-5.311e+01
Information Content per bp:1.946
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets282.2 +/- 156.4bp
Average Position of motif in Background282.4 +/- 145.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.54
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--TTCTCAGAAACT
NTTTCTNAGAAA--

MA0520.1_Stat6/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTCTCAGAAACT-
ANTTCTCAGGAANNN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTCTCAGAAACT
ATTTCCAAGAA---

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTCTCAGAAACT
TTCTNMGGAA--

MA0144.2_STAT3/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCAGAAACT
TTTCCCAGAAN--

MA0518.1_Stat4/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTCTCAGAAACT
NNNTTTCCTGGAAA--

MA0137.3_STAT1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCAGAAACT
TTTCCTGGAAA--

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTCTCAGAAACT
NATTTCCNGGAAAT-

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCTCAGAAACT
TTCTNNAGAANT

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCAGAAACT
TTTCCNGGAAAN-