Information for 23-CGCGCGCG (Motif 22)


Reverse Opposite:

p-value:1e-1
log p-value:-3.300e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif43.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets215.9 +/- 199.6bp
Average Position of motif in Background325.3 +/- 134.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0095.1_Zfp161_1/Jaspar

Match Rank:1
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGCG-----
TGGCGCGCGCGCCTGA

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGCG-----
NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGCG-----
ANCGCGCGCCCTTNN

MA0506.1_NRF1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGCGCGCG--
GCGCCTGCGCA

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGCGCGCG
GGCGCGCT

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGCG-
CTGCGCATGCGC

MA0527.1_ZBTB33/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGCG-----
CTCTCGCGAGATCTG

MA0024.2_E2F1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCGCG
CCTCCCGCCCN

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCGCG----
GTTCTCGCGAGANCC

GFX(?)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGCG-
ATTCTCGCGAGA