Information for 24-GATGAGACGA (Motif 23)


Reverse Opposite:

p-value:1e-1
log p-value:-3.267e+00
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets291.2 +/- 129.8bp
Average Position of motif in Background267.6 +/- 150.6bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GATGAGACGA
NBWGATAAGR---

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GATGAGACGA-
TAAACTGATAAGAAGAT

MA0037.2_GATA3/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GATGAGACGA
AGATAAGA---

MA0482.1_Gata4/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GATGAGACGA
NNGAGATAAGA---

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATGAGACGA
CAGATAAGGN--

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GATGAGACGA
NAGATAAGNN--

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GATGAGACGA-
TATAGAGATAAGAATTG

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GATGAGACGA
CATGAC----

MA0029.1_Mecom/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATGAGACGA--
AAGATAAGATAACA

MA0035.3_Gata1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GATGAGACGA
ANAGATAAGAA--