Information for 1-ATTCGATGAT (Motif 3)


Reverse Opposite:

p-value:1e-19
log p-value:-4.598e+01
Information Content per bp:1.948
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets287.3 +/- 156.1bp
Average Position of motif in Background190.7 +/- 49.9bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ATTCGATGAT--
NNTAAAAACGATGTTNT

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATTCGATGAT--------
-TNNNATGATTTCNNCNN

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATTCGATGAT---
TAATTCAATGAAGTG

PH0014.1_Cphx/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATTCGATGAT
NTTGATTNNATCAN

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ATTCGATGAT
----CATGAC

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATTCGATGAT
YTAATYNRATTA-

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATTCGATGAT
TAATCHGATTAC

MA0596.1_SREBF2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATTCGATGAT
ATGGGGTGAT

PB0068.1_Sox1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATTCGATGAT-
AATCAATTCAATAATT

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATTCGATGAT---
NNCATTCATTCATNNN