Information for 6-CTGTGAGTTGAA (Motif 4)


Reverse Opposite:

p-value:1e-19
log p-value:-4.502e+01
Information Content per bp:1.904
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif22.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets273.0 +/- 143.9bp
Average Position of motif in Background252.7 +/- 169.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0100.2_Myb/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGTGAGTTGAA
-TGGCAGTTGN-

MA0483.1_Gfi1b/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGAGTTGAA
TGCTGTGATTT---

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAGTTGAA
GCTGTG-------

MA0038.1_Gfi1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGTGAGTTGAA
CNGTGATTTN--

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGAGTTGAA--
NNNTGGCAGTTGGTNN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGTGAGTTGAA
-TGGCAGTTGG-

MA0479.1_FOXH1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTGAGTTGAA
-TGTGGATTNNN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAGTTGAA
GCAGTGATTT---

MA0002.2_RUNX1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTGTGAGTTGAA
GTCTGTGGTTT---

MA0595.1_SREBF1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGTGAGTTGAA
--GTGGGGTGAT