Information for 13-TGCACACACACC (Motif 8)


Reverse Opposite:

p-value:1e-11
log p-value:-2.624e+01
Information Content per bp:1.699
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif1273.4
Percentage of Background Sequences with motif2.70%
Average Position of motif in Targets282.8 +/- 146.0bp
Average Position of motif in Background273.0 +/- 199.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.98
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TGCACACACACC-
AGCGGCACACACGCAA

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TGCACACACACC
TACATGTGCACATAAAA-

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGCACACACACC-
CGAAGCACACAAAATA

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TGCACACACACC
CAGATGTGCACATACGT-

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGCACACACACC
--CRCCCACGCA

MA0472.1_EGR2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGCACACACACC-
CCCCCGCCCACGCAC

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGCACACACACC
NNTTTGCACACGGCCC

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------TGCACACACACC
NNNVCTGWGYAAACASN--

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCACACACACC
YCCGCCCACGCN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGCACACACACC---
---GGCCACACCCAN