Information for 5-CATTCATTCATT (Motif 10)


Reverse Opposite:

p-value:1e-5
log p-value:-1.264e+01
Information Content per bp:1.836
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif5.41%
Number of Background Sequences with motif174.2
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets141.9 +/- 54.2bp
Average Position of motif in Background110.1 +/- 67.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--CATTCATTCATT--
NNCATTCATTCATNNN

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CATTCATTCATT
GACCACATTCATACAAT

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CATTCATTCATT---
GACNTCATTAATAANN

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CATTCATTCATT-----
---ACATTCATGACACG

PH0019.1_Dbx2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATTCATTCATT---
NAATTAATTAATTNNN

PH0146.1_Pou3f1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATTCATTCATT----
NANTTAATTAATTANNN

PH0120.1_Nkx6-3/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CATTCATTCATT---
CNNANTAATTAATTNNC

PH0173.1_Uncx/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CATTCATTCATT---
CNCNTTAATTAATTANN

PB0005.1_Bbx_1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATTCATTCATT--
NANTTCATTGAATTA

PH0149.1_Pou3f4/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATTCATTCATT----
GANTTAATTAATTAANN