Information for 3-ATAGCCCA (Motif 13)


Reverse Opposite:

p-value:1e-4
log p-value:-1.082e+01
Information Content per bp:1.832
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif18.02%
Number of Background Sequences with motif3105.1
Percentage of Background Sequences with motif6.31%
Average Position of motif in Targets98.3 +/- 67.1bp
Average Position of motif in Background125.1 +/- 76.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATAGCCCA--
-CTGCCCGCA

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATAGCCCA
--TGCCAA

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATAGCCCA----
YCCGCCCACGCN

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATAGCCCA------
GGTCCCGCCCCCTTCTC

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATAGCCCA---
ACTAGCCAATCA

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------ATAGCCCA--
ANANGTGATACCCCATT

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATAGCCCA----
--CRCCCACGCA

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATAGCCCA
-CAGCC--

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ATAGCCCA----
AAGCATACGCCCAACTT

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------ATAGCCCA--
ANANNTGATACCCNATN