Information for 7-CTCAAAAAAA (Motif 14)


Reverse Opposite:

p-value:1e-4
log p-value:-9.594e+00
Information Content per bp:1.880
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif16.22%
Number of Background Sequences with motif2841.9
Percentage of Background Sequences with motif5.78%
Average Position of motif in Targets126.7 +/- 65.8bp
Average Position of motif in Background123.9 +/- 81.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CTCAAAAAAA--
TACTGGAAAAAAAA

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CTCAAAAAAA------
GTTCAAAAAAAAAATTC

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CTCAAAAAAA------
GTTAAAAAAAAAAATTA

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTCAAAAAAA----
CTACCAATAAAATTCT

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTCAAAAAAA--
AGCCGAAAAAAAAAT

PH0068.1_Hoxc13/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTCAAAAAAA--
AAAGCTCGTAAAATTT

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTCAAAAAAA
NCYAATAAAA-

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTCAAAAAAA----
ATATCAAAACAAAACA

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTCAAAAAAA--
AAATAAGAAAAAAC

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTCAAAAAAA----
AACCCAATAAAATTCG