Information for 2-ACAYSTGTTMTT (Motif 3)


Reverse Opposite:

p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.756
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif6.31%
Number of Background Sequences with motif66.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets84.3 +/- 42.2bp
Average Position of motif in Background117.3 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0047.1_Myf6_1/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---ACAYSTGTTMTT-
CNGACACCTGTTCNNN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACAYSTGTTMTT
ACAGCTGTTV--

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACAYSTGTTMTT
-CACGTGNT---

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACAYSTGTTMTT
ACAGCTGTTN--

MA0499.1_Myod1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACAYSTGTTMTT
TGCAGCTGTCCCT

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACAYSTGTTMTT---
NCNTTTGTTATTTNN

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACAYSTGTTMTT
ACCACGTGGTNN-

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACAYSTGTTMTT
CGACCATCTGTT---

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACAYSTGTTMTT
-CAGCTGTT---

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACAYSTGTTMTT
-CACGTGDC---