| p-value: | 1e-5 |
| log p-value: | -1.173e+01 |
| Information Content per bp: | 1.943 |
| Number of Target Sequences with motif | 5.0 |
| Percentage of Target Sequences with motif | 0.44% |
| Number of Background Sequences with motif | 11.1 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 174.8 +/- 127.2bp |
| Average Position of motif in Background | 270.2 +/- 197.2bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 2.60 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.67
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CCAGACGAGCAT
CCAGACRSVB-- |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 2 |
| Score: | 0.63
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CCAGACGAGCAT
CCAGACAG---- |
|
|
|
MA0092.1_Hand1::Tcfe2a/Jaspar
| Match Rank: | 3 |
| Score: | 0.62
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCAGACGAGCAT
ATGCCAGACN----- |
|
|
|
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 4 |
| Score: | 0.61
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CCAGACGAGCAT----
GCAGCCAAGCGTGACN |
|
|
|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.57
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CCAGACGAGCAT
CAAATCCAGACATCACA |
|
|
|
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 6 |
| Score: | 0.57
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CCAGACGAGCAT---
SCAGYCADGCATGAC |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 7 |
| Score: | 0.56
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CCAGACGAGCAT
BCAGACWA---- |
|
|
|
MA0014.2_PAX5/Jaspar
| Match Rank: | 8 |
| Score: | 0.55
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CCAGACGAGCAT---
GAGGGCAGCCAAGCGTGAC |
|
|
|
MA0103.2_ZEB1/Jaspar
| Match Rank: | 9 |
| Score: | 0.55
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CCAGACGAGCAT
-CAGGTGAGG-- |
|
|
|
PB0151.1_Myf6_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.53
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CCAGACGAGCAT
AGCAACAGCCGCACC- |
|
|
|
