Information for 19-GCGGCTTTTTGC (Motif 16)


Reverse Opposite:

p-value:1e-4
log p-value:-9.522e+00
Information Content per bp:1.880
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif56.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets266.8 +/- 127.2bp
Average Position of motif in Background247.9 +/- 128.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)4.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCGGCTTTTTGC-----
--ANATTTTTGCAANTN

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GCGGCTTTTTGC-
------TTTTCCA

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCGGCTTTTTGC-
---YCTTTGTTCC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCGGCTTTTTGC-----
---TTTTTTTTCNNGTN

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCGGCTTTTTGC
----CTGTTTAC

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCGGCTTTTTGC-
---CCWTTGTYYB

MA0480.1_Foxo1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCGGCTTTTTGC-
--TCCTGTTTACA

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCGGCTTTTTGC--------
---NSTGTTTRCWCAGBNNN

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCGGCTTTTTGC
GGNGCGNCTGTTNNN

MA0442.1_SOX10/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCGGCTTTTTGC
----CTTTGT--