Information for 19-ATATGTRYAY (Motif 17)


Reverse Opposite:

p-value:1e-4
log p-value:-9.448e+00
Information Content per bp:1.755
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif6.79%
Number of Background Sequences with motif2090.6
Percentage of Background Sequences with motif4.32%
Average Position of motif in Targets257.5 +/- 139.6bp
Average Position of motif in Background244.5 +/- 138.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.95
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ATATGTRYAY-
NNTATANATATACN

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----ATATGTRYAY--
ATGGGATATATCCGCCT

MA0033.1_FOXL1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATATGTRYAY
-TATGTNTA-

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------ATATGTRYAY-
ANTNNTACATGTANNTN

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------ATATGTRYAY-
ANTNTTACATGTATNTA

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------ATATGTRYAY-
NNTATTACATGTANNNT

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------ATATGTRYAY-
ANTTNTACATGTANTTN

PH0083.1_Irx3_1/Jaspar

Match Rank:8
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------ATATGTRYAY-
ANTATTACATGTANNNN

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------ATATGTRYAY-
NNTTTTACATGTANNNT

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATATGTRYAY-----
NTNTATGTGCACATNNN