Information for 12-TCCAGGCT (Motif 18)


Reverse Opposite:

p-value:1e-3
log p-value:-8.277e+00
Information Content per bp:1.970
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif7.84%
Number of Background Sequences with motif2590.1
Percentage of Background Sequences with motif5.35%
Average Position of motif in Targets214.3 +/- 145.5bp
Average Position of motif in Background242.5 +/- 143.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCCAGGCT-
----NGCTN

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCCAGGCT-
-CTAGGCCT

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCCAGGCT-
-BCAGACWA

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGGCT
ATGCCAGACN

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCAGGCT-
-CNAGGCCT

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCCAGGCT
RCATTCCWGG--

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCAGGCT-
-CCAGACAG

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCCAGGCT-----
CAAATCCAGACATCACA

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TCCAGGCT-
NNNCTTTCCAGGAAA

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCAGGCT--
ANCAGGATGT