Information for 8-CGGRGAATGCTT (Motif 2)


Reverse Opposite:

p-value:1e-22
log p-value:-5.113e+01
Information Content per bp:1.727
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets229.5 +/- 139.9bp
Average Position of motif in Background139.4 +/- 48.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.64
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGGRGAATGCTT
GNNACCGAGAATNNN-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGRGAATGCTT
CCWGGAATGY--

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGGRGAATGCTT
CSTGGGAAAD---

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGRGAATGCTT
TGGGGA------

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CGGRGAATGCTT
NNNACCGAGAGTNNN-

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGGRGAATGCTT
CCWGGAATGY--

MA0090.1_TEAD1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGGRGAATGCTT
CNGAGGAATGTG-

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGGRGAATGCTT
NCTGGAATGC--

MA0164.1_Nr2e3/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CGGRGAATGCTT-
------AAGCTTG

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CGGRGAATGCTT--
--GGGATTGCATNN