Information for 24-CCTCCGAACG (Motif 20)


Reverse Opposite:

p-value:1e-1
log p-value:-4.143e+00
Information Content per bp:1.973
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets355.5 +/- 102.9bp
Average Position of motif in Background272.4 +/- 99.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)6.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTCCGAACG
GCTCCG----

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCTCCGAACG--
TATCATTAGAACGCT

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCTCCGAACG
TTCCKNAGAA--

PB0115.1_Ehf_2/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCTCCGAACG-
TAGTATTTCCGATCTT

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCTCCGAACG
CNGTCCTCCC----

MA0520.1_Stat6/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCTCCGAACG
CATTTCCTGAGAAAT

MA0504.1_NR2C2/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCGAACG--
TGACCTCTGACCCCN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCTCCGAACG
CSTGGGAAAD

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CCTCCGAACG
HACTTCCGGY--

POL001.1_MTE/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CCTCCGAACG----------
-TTTCGAGCGGAACGGTCGC