Information for 10-GCATTCTACTTA (Motif 3)


Reverse Opposite:

p-value:1e-21
log p-value:-4.839e+01
Information Content per bp:1.924
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets224.4 +/- 135.0bp
Average Position of motif in Background254.0 +/- 103.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GCATTCTACTTA
-----ATACTTA

MA0122.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCATTCTACTTA-
----NCCACTTAN

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCATTCTACTTA----
ACATGCTACCTAATAC

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCATTCTACTTA----
ACTTGCTACCTACACC

MA0090.1_TEAD1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCATTCTACTTA
CACATTCCTCCG-

MA0027.1_En1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCATTCTACTTA
GANCACTACTT-

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCATTCTACTTA-----
CTTAACCACTTAAGGAT

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCATTCTACTTA-----
GAAAACTAGTTAACATC

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCATTCTACTTA-----
CATAACCACTTAACAAC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCATTCTACTTA
RCATTCCWGG--