Information for 7-TAATTCCGTT (Motif 4)


Reverse Opposite:

p-value:1e-16
log p-value:-3.877e+01
Information Content per bp:1.960
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets273.7 +/- 119.1bp
Average Position of motif in Background263.2 +/- 171.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0075.1_Prrx2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TAATTCCGTT
TAATT-----

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TAATTCCGTT
TAATCCCN--

PB0115.1_Ehf_2/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TAATTCCGTT---
TAGTATTTCCGATCTT

MA0132.1_Pdx1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TAATTCCGTT
CTAATT-----

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TAATTCCGTT
HACTTCCGGY

MA0136.1_ELF5/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TAATTCCGTT
TACTTCCTT-

PB0020.1_Gabpa_1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TAATTCCGTT----
NNNNACTTCCGGTATNN

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TAATTCCGTT
NRYTTCCGGY

PB0012.1_Elf3_1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAATTCCGTT--
TTACTTCCTNGTN

PH0121.1_Obox1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TAATTCCGTT--
NTAGTTAATCCCCTTAN