Information for 12-TGTTTCAAAACT (Motif 5)


Reverse Opposite:

p-value:1e-14
log p-value:-3.445e+01
Information Content per bp:1.980
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets243.2 +/- 134.5bp
Average Position of motif in Background156.2 +/- 141.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGTTTCAAAACT
CGGTTTCAAA---

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGTTTCAAAACT
NATGTTGCAA----

MA0102.3_CEBPA/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTTTCAAAACT
-ATTGCACAATA

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTCAAAACT
NNTTTTTCTTATNT

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGTTTCAAAACT---
CGTATCGAAACCAAA

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTCAAAACT
TGGTTTCAGT---

MA0466.1_CEBPB/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTTTCAAAACT
TATTGCACAAT-

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTCAAAACT----
NNTTTTCACACCTTNNN

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTTTCAAAACT--
CAATTGCAAAAATAT

PB0197.1_Zfp105_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTTTCAAAACT----
ATGGTTCAATAATTTTG