Information for 5-GACCGCTG (Motif 7)


Reverse Opposite:

p-value:1e-6
log p-value:-1.605e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif178.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets217.1 +/- 96.5bp
Average Position of motif in Background231.3 +/- 143.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0521.1_Tcf12/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GACCGCTG---
AACAGCTGCAG

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GACCGCTG
AACAGCTG

MA0500.1_Myog/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GACCGCTG---
GACAGCTGCAG

MA0499.1_Myod1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GACCGCTG--
NGNGACAGCTGCN

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GACCGCTG---
NNNNTTGACCCCTNNNN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GACCGCTG-
BAACAGCTGT

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GACCGCTG---
-HCAGCTGDTN

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GACCGCTG--
NNAGCAGCTGCT

MA0512.1_Rxra/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GACCGCTG
NCTGACCTTTG

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GACCGCTG-
NNACAGCTGC