Information for 14-CTCTCTCTCTCT (Motif 8)


Reverse Opposite:

p-value:1e-5
log p-value:-1.371e+01
Information Content per bp:1.867
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.05%
Number of Background Sequences with motif584.6
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets205.7 +/- 139.3bp
Average Position of motif in Background262.6 +/- 137.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0508.1_PRDM1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCTCTCT
TCACTTTCACTTTCN

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCTCT
ACTTTCACTTTC-

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTCTCTCT
ANTCCTTTGTCTNNNN

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCTCT
ACTTTCACTTTC-

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTCTCTCT-
ACCACTCTCGGTCAC

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCTCT
AGTTTCAGTTTC-

MA0050.2_IRF1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CTCTCTCTCTCT----
TTTTACTTTCACTTTCACTTT

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTCTCTCTCTCT-
CTGTCTGTCACCT

MA0498.1_Meis1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTCTCTCT-
AGCTGTCACTCACCT

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCTCT
RSTTTCRSTTTC-