Information for 7-AATCATCA (Motif 9)


Reverse Opposite:

p-value:1e-5
log p-value:-1.360e+01
Information Content per bp:1.931
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif4.18%
Number of Background Sequences with motif942.6
Percentage of Background Sequences with motif1.95%
Average Position of motif in Targets248.5 +/- 155.4bp
Average Position of motif in Background246.5 +/- 152.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----AATCATCA---
TAGTGATCATCATTA

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------AATCATCA--
AAGGCGAAATCATCGCA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AATCATCA
-GTCATN-

MA0496.1_MAFK/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AATCATCA----
CTGAGTCAGCAATTT

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATCATCA-------
TCACCCATCAATAAACA

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATCATCA-----
HWWGTCAGCAWWTTT

MA0495.1_MAFF/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AATCATCA------
GCTGAGTCAGCAATTTTT

MA0479.1_FOXH1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AATCATCA
TCCAATCCACA

PB0042.1_Mafk_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATCATCA------
AAGTCAGCANTTTTN

MA0038.1_Gfi1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATCATCA
CAAATCACTG