Information for 5-CAYATACC (Motif 10)


Reverse Opposite:

p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.766
Number of Target Sequences with motif349.0
Percentage of Target Sequences with motif7.08%
Number of Background Sequences with motif2246.9
Percentage of Background Sequences with motif4.98%
Average Position of motif in Targets270.2 +/- 158.8bp
Average Position of motif in Background276.7 +/- 164.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0464.1_Bhlhe40/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAYATACC-
CTCACGTGCAC

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAYATACC-
GCACGTACCC

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAYATACC-
KCACGTGMCN

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAYATACC
CACGTGNC

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAYATACC
GCACGTNC-

MA0058.2_MAX/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAYATACC-
CCATGTGCTT

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAYATACC
GCACGTAY-

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAYATACC-
CCACGTGGNN

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAYATACC
CACGTGDC

MA0147.2_Myc/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAYATACC-
CCATGTGCTT