Information for 6-AGTAGCTG (Motif 11)


Reverse Opposite:

p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.884
Number of Target Sequences with motif1446.0
Percentage of Target Sequences with motif29.35%
Number of Background Sequences with motif11484.1
Percentage of Background Sequences with motif25.43%
Average Position of motif in Targets280.7 +/- 157.1bp
Average Position of motif in Background272.9 +/- 156.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AGTAGCTG--
NNAGCAGCTGCT

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AGTAGCTG-
CAGCAGCTGN

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AGTAGCTG-----
NNNNAGCAGCTGCTGAN

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGTAGCTG
AACAGCTG

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGTAGCTG-
BAACAGCTGT

MA0522.1_Tcf3/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGTAGCTG--
NTGCAGCTGTG

MA0500.1_Myog/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGTAGCTG---
GACAGCTGCAG

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGTAGCTG-
NAHCAGCTGD

MA0521.1_Tcf12/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGTAGCTG---
AACAGCTGCAG

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------AGTAGCTG--
ATTTACAGTAGCAAAA