Information for 17-CTGGAGCAGCGC (Motif 13)


Reverse Opposite:

p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.956
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets274.6 +/- 150.7bp
Average Position of motif in Background349.1 +/- 194.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGGAGCAGCGC
-GGGAGGACNG-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGGAGCAGCGC
CCAGGAACAG---

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGGAGCAGCGC
-CGGAGC-----

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTGGAGCAGCGC
------CAGCC-

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTGGAGCAGCGC
TGCTGASTCAGC--

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTGGAGCAGCGC
TGCCCTGGGGCNANN-

MA0152.1_NFATC2/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGGAGCAGCGC
-TGGAAAA----

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTGGAGCAGCGC--
NNAGGGACAAGGGCNC

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTGGAGCAGCGC--
GCCGCGCAGTGCGT

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CTGGAGCAGCGC
----CACAGN--