Information for 8-AARCCGCG (Motif 16)


Reverse Opposite:

p-value:1e-7
log p-value:-1.787e+01
Information Content per bp:1.751
Number of Target Sequences with motif292.0
Percentage of Target Sequences with motif5.93%
Number of Background Sequences with motif1917.5
Percentage of Background Sequences with motif4.25%
Average Position of motif in Targets274.1 +/- 163.4bp
Average Position of motif in Background279.3 +/- 153.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AARCCGCG
--TCCCCA

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AARCCGCG---
AGGCTAATCCCCAANG

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AARCCGCG--------
--GCCGCGCAGTGCGT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AARCCGCG----
ATCCCCGCCCCTAAAA

MA0130.1_ZNF354C/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AARCCGCG
-ATCCAC-

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AARCCGCG
GGAAATCCCC-

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AARCCGCG--------
TACGCCCCGCCACTCTG

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AARCCGCG--
AAACCACANN

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AARCCGCG----
ATAAAGGCGCGCGAT

PH0035.1_Gsc/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------AARCCGCG--
AATCGTTAATCCCTTTA