Information for 9-CGCCCGGC (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.628e+01
Information Content per bp:1.925
Number of Target Sequences with motif231.0
Percentage of Target Sequences with motif4.69%
Number of Background Sequences with motif1478.5
Percentage of Background Sequences with motif3.27%
Average Position of motif in Targets280.4 +/- 161.1bp
Average Position of motif in Background273.5 +/- 146.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCCCGGC----
GGCCCCGCCCCC

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CGCCCGGC--
AAGCATACGCCCAACTT

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCCCGGC
AGCGCGCC----

MA0597.1_THAP1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCCCGGC
CTGCCCGCA

MA0024.2_E2F1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CGCCCGGC
CCTCCCGCCCN--

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCCCGGC-------
TACGCCCCGCCACTCTG

MA0028.1_ELK1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCCCGGC--
CTTCCGGNNN

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CGCCCGGC---
TCACCCCGCCCCAAATT

MA0131.1_HINFP/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGCCCGGC
TAACGTCCGC-

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCGGC---
ATCCCCGCCCCTAAAA