Information for 5-NAAAAAAAAAAN (Motif 2)


Reverse Opposite:

p-value:1e-28
log p-value:-6.636e+01
Information Content per bp:1.448
Number of Target Sequences with motif1156.0
Percentage of Target Sequences with motif23.47%
Number of Background Sequences with motif7751.7
Percentage of Background Sequences with motif17.17%
Average Position of motif in Targets285.5 +/- 138.9bp
Average Position of motif in Background275.2 +/- 153.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---NAAAAAAAAAAN--
GTTAAAAAAAAAAATTA

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---NAAAAAAAAAAN--
GTTCAAAAAAAAAATTC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----NAAAAAAAAAAN
TACTGGAAAAAAAA---

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--NAAAAAAAAAAN-
AACAAACAACAAGAG

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----NAAAAAAAAAAN
AGCCGAAAAAAAAAT-

MA0041.1_Foxd3/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:NAAAAAAAAAAN-
-AAACAAACATTC

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-NAAAAAAAAAAN-
AAATAAGAAAAAAC

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----NAAAAAAAAAAN
ATATCAAAACAAAACA

MA0042.1_FOXI1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:NAAAAAAAAAAN-
-AAACAAACANNC

MA0497.1_MEF2C/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----NAAAAAAAAAAN
ATGCTAAAAATAGAA-