Information for 16-CCTAAGGT (Motif 22)


Reverse Opposite:

p-value:1e-5
log p-value:-1.247e+01
Information Content per bp:1.959
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif558.1
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets271.8 +/- 161.8bp
Average Position of motif in Background272.4 +/- 160.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0116.1_Zfp423/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CCTAAGGT---
GGCACCCAGGGGTGC

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CCTAAGGT--
NTGCCCANNGGTNA

MA0109.1_Hltf/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCTAAGGT-
NNATAAGGNN

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCTAAGGT
WTGSCCTSAGGS

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCTAAGGT
ATGCCCTGAGGC

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCTAAGGT---
NTNGCCTCAGGCNNN

MA0592.1_ESRRA/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCTAAGGT----
-CCAAGGTCACA

MA0003.2_TFAP2A/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTAAGGT----
TGCCCTGAGGCANTN

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTAAGGT----
TGCCCTGGGGCNANN

MA0141.2_Esrrb/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTAAGGT--
AGCTCAAGGTCA