Information for 19-ATTGAACG (Motif 24)


Reverse Opposite:

p-value:1e-3
log p-value:-8.893e+00
Information Content per bp:1.959
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif160.5
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets325.6 +/- 143.6bp
Average Position of motif in Background262.3 +/- 154.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------ATTGAACG--
NNANTGATTGATNNNN

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATTGAACG
NTATYGATCH

PB0144.1_Lef1_2/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------ATTGAACG--
NNANTGATTGATNTTN

PB0197.1_Zfp105_2/Jaspar

Match Rank:4
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------ATTGAACG--
NAAANTTATTGAANCAN

MA0151.1_ARID3A/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATTGAACG
ATTAAA--

MA0077.1_SOX9/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATTGAACG
CCATTGTTC-

PB0005.1_Bbx_1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------ATTGAACG-
NANTTCATTGAATTA

MA0070.1_PBX1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATTGAACG
TTTGATTGATGN

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ATTGAACG-
GGGATTGCATNN

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGAACG----
NNNNNATTGATGNGTGN