Information for 20-GAGGAGGACAGT (Motif 26)


Reverse Opposite:

p-value:1e-3
log p-value:-8.271e+00
Information Content per bp:1.974
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets274.9 +/- 160.8bp
Average Position of motif in Background223.7 +/- 122.3bp
Strand Bias (log2 ratio + to - strand density)3.1
Multiplicity (# of sites on avg that occur together)3.80
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GAGGAGGACAGT
-GGGAGGACNG-

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAGGAGGACAGT
TGCGGAGTGGGACTGG

MA0528.1_ZNF263/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGACAGT--------
GGAGGAGGAGGGGGAGGAGGA

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGGAGGACAGT---
NNNNTGAGCACTGTNNG

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAGGAGGACAGT
----AGGTCA--

MA0160.1_NR4A2/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAGGAGGACAGT
---AAGGTCAC-

MA0100.2_Myb/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GAGGAGGACAGT---
-----TGGCAGTTGN

MA0057.1_MZF1_5-13/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGACAGT
GGAGGGGGAA---

MA0598.1_EHF/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAGGAGGACAGT
CAGGAAGG----

PB0124.1_Gabpa_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGAGGACAGT
NNNNGGGGGAAGANGG-