Information for 22-TGRGCTGGRCTG (Motif 28)


Reverse Opposite:

p-value:1e-2
log p-value:-6.489e+00
Information Content per bp:1.526
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif39.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets250.9 +/- 124.4bp
Average Position of motif in Background257.1 +/- 128.2bp
Strand Bias (log2 ratio + to - strand density)3.7
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGRGCTGGRCTG
--NGCTN-----

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGRGCTGGRCTG
---GCTGTG---

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGRGCTGGRCTG-----
TATTATGGGATGGATAA

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGRGCTGGRCTG
-GGTCTGGCAT-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGRGCTGGRCTG
TWGTCTGV----

MA0483.1_Gfi1b/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGRGCTGGRCTG-
--TGCTGTGATTT

MA0596.1_SREBF2/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGRGCTGGRCTG--
----ATGGGGTGAT

POL002.1_INR/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGRGCTGGRCTG
NNNANTGA----

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TGRGCTGGRCTG-
---CCWGGAATGY

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGRGCTGGRCTG---
TGWCCTCARNTGACC