Information for 8-CGATTCCRTTCA (Motif 3)


Reverse Opposite:

p-value:1e-22
log p-value:-5.147e+01
Information Content per bp:1.920
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets281.5 +/- 138.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGATTCCRTTCA-
TNGAATTTCATTNAN

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGATTCCRTTCA----
NNCATTCATTCATNNN

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGATTCCRTTCA------
-GACCACATTCATACAAT

MA0081.1_SPIB/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGATTCCRTTCA
---TTCCTCT--

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGATTCCRTTCA
GCATTCCAGN--

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGATTCCRTTCA-
CAGTTTCGNTTCTN

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGATTCCRTTCA-------
-----ACATTCATGACACG

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGATTCCRTTCA
NRYTTCCGGH--

PB0068.1_Sox1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGATTCCRTTCA-
AATCAATTCAATAATT

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGATTCCRTTCA
CACTTCCYCTTT