Information for 8-TCCCGCCTCA (Motif 11)


Reverse Opposite:

p-value:1e-22
log p-value:-5.226e+01
Information Content per bp:1.654
Number of Target Sequences with motif5912.0
Percentage of Target Sequences with motif34.83%
Number of Background Sequences with motif10346.7
Percentage of Background Sequences with motif31.27%
Average Position of motif in Targets238.2 +/- 134.1bp
Average Position of motif in Background235.9 +/- 135.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0471.1_E2F6/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCCTCA
NCTTCCCGCCC--

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGCCTCA
TTCCCGCCWG-

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCCTCA
NYTTCCCGCC---

MA0470.1_E2F4/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCCTCA
NNTTCCCGCCC--

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TCCCGCCTCA
VDTTTCCCGCCA--

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TCCCGCCTCA----
GCCCCGCCCCCTCCC

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TCCCGCCTCA----
CTCCCGCCCCCACTC

MA0024.2_E2F1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGCCTCA
CCTCCCGCCCN-

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCCTCA
DTTTCCCGCC---

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCCCGCCTCA---
TACGCCCCGCCACTCTG