Information for 2-ASTATAGG (Motif 12)


Reverse Opposite:

p-value:1e-19
log p-value:-4.489e+01
Information Content per bp:1.775
Number of Target Sequences with motif3004.0
Percentage of Target Sequences with motif17.70%
Number of Background Sequences with motif5005.9
Percentage of Background Sequences with motif15.13%
Average Position of motif in Targets231.2 +/- 133.7bp
Average Position of motif in Background236.4 +/- 135.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ASTATAGG-------
TGCGCATAGGGGAGGAG

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ASTATAGG
TATACATA--

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ASTATAGG
AAACCACAGC

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ASTATAGG
CCAAAAATAG-

MA0077.1_SOX9/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ASTATAGG
GAACAATGG-

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ASTATAGG
--CACAGN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ASTATAGG
NAAACCACAG-

PB0161.1_Rxra_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ASTATAGG-------
TCGCGAAGGTTGTACT

MA0002.2_RUNX1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ASTATAGG-
AAACCACAGAN

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ASTATAGG------
CATACAATACGAAATAA