Information for 4-GATGGTCT (Motif 14)


Reverse Opposite:

p-value:1e-19
log p-value:-4.376e+01
Information Content per bp:1.928
Number of Target Sequences with motif1705.0
Percentage of Target Sequences with motif10.04%
Number of Background Sequences with motif2677.8
Percentage of Background Sequences with motif8.09%
Average Position of motif in Targets238.1 +/- 138.0bp
Average Position of motif in Background234.8 +/- 134.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----GATGGTCT----
NNANTGGTGGTCTTNNN

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GATGGTCT
AACAGATGGTCN

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GATGGTCT
GTTAATGGCC-

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GATGGTCT
CGTGGGTGGTCC

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------GATGGTCT--
AAGGCCAGATGGTCCGG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GATGGTCT--
--TWGTCTGV

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GATGGTCT
AACAGATGGC--

MA0461.1_Atoh1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATGGTCT
CAGATGGC--

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GATGGTCT--
--CTGTCTGG

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GATGGTCT------
NNATTGGACTTTNGNN