Information for 5-TCTACTAC (Motif 15)


Reverse Opposite:

p-value:1e-18
log p-value:-4.242e+01
Information Content per bp:1.815
Number of Target Sequences with motif3107.0
Percentage of Target Sequences with motif18.30%
Number of Background Sequences with motif5218.3
Percentage of Background Sequences with motif15.77%
Average Position of motif in Targets235.3 +/- 139.8bp
Average Position of motif in Background233.4 +/- 135.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0122.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCTACTAC-
NCCACTTAN

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCTACTAC
ATCCAC---

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TCTACTAC--
NNNTTTNTAATACNG

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCTACTAC-----
NNGATCTAGAACCTNNN

MA0032.1_FOXC1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCTACTAC-----
-----TACTNNNN

MA0027.1_En1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCTACTAC
GANCACTACTT-

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCTACTAC----
NNNATTTTACGACNNTN

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCTACTAC----
GNNNTTTTACGACCTNA

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCTACTAC
SSAATCCACANN

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCTACTAC----
NNNTTTTACGACNTTN