Information for 7-CTCAGCCT (Motif 16)


Reverse Opposite:

p-value:1e-16
log p-value:-3.741e+01
Information Content per bp:1.859
Number of Target Sequences with motif6222.0
Percentage of Target Sequences with motif36.65%
Number of Background Sequences with motif11126.6
Percentage of Background Sequences with motif33.62%
Average Position of motif in Targets235.2 +/- 131.7bp
Average Position of motif in Background237.4 +/- 135.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGCCT
NCGTCAGC--

MA0146.2_Zfx/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CTCAGCCT-
GGGGCCGAGGCCTG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCAGCCT-
-BCAGACWA

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTCAGCCT
--CAGCC-

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGCCT
TGAGTCAGCA-

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTCAGCCT
ATGACTCAGCAD

MA0496.1_MAFK/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCAGCCT---
CTGAGTCAGCAATTT

POL002.1_INR/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCAGCCT-
-TCAGTCTT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCCT----
HWWGTCAGCAWWTTT

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGCCT---
NAGCCCCGCCCCCN