Information for 17-GCTGATGTGTGC (Motif 18)


Reverse Opposite:

p-value:1e-15
log p-value:-3.519e+01
Information Content per bp:1.962
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets232.2 +/- 138.4bp
Average Position of motif in Background256.8 +/- 153.3bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)2.70
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTGATGTGTGC----
NNNNTTGTGTGCTTNN

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTGATGTGTGC----
NNGCGTGTGTGCNGCN

MA0117.1_Mafb/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGATGTGTGC
GCTGACGC----

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGATGTGTGC
NNNNNATTGATGNGTGN

MA0060.2_NFYA/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTGATGTGTGC-
AGAGTGCTGATTGGTCCA

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTGATGTGTGC-------
--NTNTATGTGCACATNNN

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTGATGTGTGC
--TGACGT----

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCTGATGTGTGC--------
---NSTGTTTRCWCAGBNNN

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCTGATGTGTGC
CCCCCTGCTGTG---

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCTGATGTGTGC
TNTCCTGCTGTGNNG