Information for 3-GATTCCATTCGA (Motif 2)


Reverse Opposite:

p-value:1e-51
log p-value:-1.181e+02
Information Content per bp:1.599
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets234.3 +/- 123.8bp
Average Position of motif in Background288.7 +/- 106.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GATTCCATTCGA
TNGAATTTCATTNAN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GATTCCATTCGA
GCATTCCAGN---

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GATTCCATTCGA
ATTTTCCATT---

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATTCCATTCGA
GGGATTGCATNN--

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATTCCATTCGA
CAGTTTCGNTTCTN

MA0468.1_DUX4/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GATTCCATTCGA
TGATTAAATTA--

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATTCCATTCGA
RCATTCCWGG---

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATTCCATTCGA---
NNCATTCATTCATNNN

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GATTCCATTCGA
NNNTCCATCCCATAANN

MA0090.1_TEAD1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GATTCCATTCGA---
---CACATTCCTCCG