Information for 8-CTCGCTAA (Motif 20)


Reverse Opposite:

p-value:1e-13
log p-value:-2.995e+01
Information Content per bp:1.846
Number of Target Sequences with motif2900.0
Percentage of Target Sequences with motif17.08%
Number of Background Sequences with motif4973.8
Percentage of Background Sequences with motif15.03%
Average Position of motif in Targets233.8 +/- 138.1bp
Average Position of motif in Background234.6 +/- 133.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------CTCGCTAA-
NNAATTCTCGNTNAN

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CTCGCTAA----
TACGCCCCGCCACTCTG

MA0527.1_ZBTB33/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCGCTAA-----
CTCTCGCGAGATCTG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTCGCTAA
CACGCA--

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTCGCTAA
TBGCACGCAA-

GFX(?)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTCGCTAA-
ATTCTCGCGAGA

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTCGCTAA---
GGNTCTCGCGAGAAC

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTCGCTAA
VDTTTCCCGCCA-

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCGCTAA
--NGCTN-

MA0470.1_E2F4/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTCGCTAA
NNTTCCCGCCC-