Information for 9-GACTCGAA (Motif 21)


Reverse Opposite:

p-value:1e-12
log p-value:-2.959e+01
Information Content per bp:1.907
Number of Target Sequences with motif166.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif173.5
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets240.4 +/- 129.3bp
Average Position of motif in Background239.2 +/- 139.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GACTCGAA------
CGTATCGAAACCAAA

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACTCGAA-----
CAAAATCGAAACTAA

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACTCGAA----
GAGAACCGAAACTG

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GACTCGAA-----
ATAAACCGAAACCAA

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GACTCGAA----
TACGAGACTCCTCTAAC

MA0099.2_JUN::FOS/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GACTCGAA
TGACTCA--

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GACTCGAA----
ATAACCACTTGAAAATT

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GACTCGAA---
AGAAACGAAAGT

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GACTCGAA---
NNNNTGACCCGGCGCG

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GACTCGAA
CGGTTTCAAA