Information for 19-TTCGTTGGAA (Motif 23)


Reverse Opposite:

p-value:1e-12
log p-value:-2.848e+01
Information Content per bp:1.983
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets246.0 +/- 111.5bp
Average Position of motif in Background255.5 +/- 163.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTCGTTGGAA
TTCTNMGGAA

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TTCGTTGGAA
ANTTCTNNAGAA

MA0520.1_Stat6/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTCGTTGGAA---
ANTTCTCAGGAANNN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTCGTTGGAA--
--CSTGGGAAAD

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTCGTTGGAA----
TATCATTAGAACGCT

MA0152.1_NFATC2/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TTCGTTGGAA--
-----TGGAAAA

MA0161.1_NFIC/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTCGTTGGAA
----TTGGCA

MA0144.2_STAT3/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTCGTTGGAA-
CTTCTGGGAAA

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCGTTGGAA------
AAGATCGGAANTNNNA

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTCGTTGGAA----
NGTAGGTTGGCATNNN